Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce2847Response regulator/GGDEF domain protein; Family membership. (391 aa)    
Predicted Functional Partners:
sce1346
Hybrid histidine kinase; Family membership.
 
0.976
sce7776
Two-component hybrid histidine kinase; Family membership.
 
0.954
torS
TorS protein; Family membership.
 
 0.942
sce0723
Two-component hybrid sensor and regulator; Family membership.
 
 
 0.935
sce7159
Two-component hybrid sensor and regulator; Family membership.
 
 0.934
sce1939
Two-component hybrid sensor and regulator; Family membership.
 
0.927
sce4365
Hybrid Histidine Kinase; Family membership.
 
 
 0.922
sce4309
Hybrid sensory histidine kinase; Family membership.
 
 0.904
sce6826
Two-component hybrid sensor and regulator; Family membership.
 
 
0.888
sce7214
Two component sensor kinase; Family membership.
 
 
 
 0.888
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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