STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2893Putative short-chain dehydrogenases; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (281 aa)    
Predicted Functional Partners:
sce2024
Hydroxysteroid (17-beta) dehydrogenase 4.
 0.971
sce0820
Polyketide synthase; Family membership; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.912
sce6685
SDR family short chain oxidoreductase; Specificity unclear; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.768
sce4978
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.759
fabG8
3-oxoacyl-[acyl-carrier-protein] reductase; High confidence in function and specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.750
sce0337
Oxidoreductase, short chain dehydrogenase/reductase family; Function unclear; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.718
sce0668
Putative Oxidoreductase; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.642
fabG5
3-oxoacyl-[acyl-carrier-protein] reductase; Family membership.
  
     0.634
sce6823
NRPS/PKS hybrid.
  
 
 0.574
fabG12
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; Family membership.
  
     0.574
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.