STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2893Putative short-chain dehydrogenases; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (281 aa)    
Predicted Functional Partners:
sce2024
Hydroxysteroid (17-beta) dehydrogenase 4.
 0.972
sce6685
SDR family short chain oxidoreductase; Specificity unclear; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.767
sce4978
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.758
fabG8
3-oxoacyl-[acyl-carrier-protein] reductase; High confidence in function and specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.749
sce0337
Oxidoreductase, short chain dehydrogenase/reductase family; Function unclear; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.716
sce0668
Putative Oxidoreductase; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.641
fabG5
3-oxoacyl-[acyl-carrier-protein] reductase; Family membership.
  
     0.634
fabG12
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; Family membership.
  
     0.574
sce2387
Non-ribosomal peptide synthetase; Family membership.
  
 
 0.539
sce4308
Dehydrogenase; Family membership.
  
     0.520
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.