Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aglR1 | sce2894 | sce2993 | sce2894 | Adventurous gliding motility protein R; Family membership. | Putetive secreted protein. | 0.400 |
aglR1 | tolQ1 | sce2993 | sce0649 | Adventurous gliding motility protein R; Family membership. | Putative transport transmembrane protein, tolQ; High confidence in function and specificity. | 0.571 |
aglR2 | sce2894 | sce2994 | sce2894 | Adventurous gliding motility protein R. | Putetive secreted protein. | 0.400 |
aglR2 | tolQ1 | sce2994 | sce0649 | Adventurous gliding motility protein R. | Putative transport transmembrane protein, tolQ; High confidence in function and specificity. | 0.419 |
sce2893 | sce2894 | sce2893 | sce2894 | Putative short-chain dehydrogenases; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Putetive secreted protein. | 0.417 |
sce2894 | aglR1 | sce2894 | sce2993 | Putetive secreted protein. | Adventurous gliding motility protein R; Family membership. | 0.400 |
sce2894 | aglR2 | sce2894 | sce2994 | Putetive secreted protein. | Adventurous gliding motility protein R. | 0.400 |
sce2894 | sce2893 | sce2894 | sce2893 | Putetive secreted protein. | Putative short-chain dehydrogenases; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.417 |
sce2894 | sce2895 | sce2894 | sce2895 | Putetive secreted protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.628 |
sce2894 | sce2896 | sce2894 | sce2896 | Putetive secreted protein. | Putative membrane protein. | 0.585 |
sce2894 | sce4315 | sce2894 | sce4315 | Putetive secreted protein. | Biopolymer transport protein, putative; Specificity unclear. | 0.400 |
sce2894 | tolQ1 | sce2894 | sce0649 | Putetive secreted protein. | Putative transport transmembrane protein, tolQ; High confidence in function and specificity. | 0.400 |
sce2894 | tolQ2 | sce2894 | sce4253 | Putetive secreted protein. | TolQ protein; Specificity unclear. | 0.400 |
sce2894 | tolQ3 | sce2894 | sce5071 | Putetive secreted protein. | tolQ protein; High confidence in function and specificity. | 0.400 |
sce2895 | sce2894 | sce2895 | sce2894 | Hypothetical protein predicted by Glimmer/Critica. | Putetive secreted protein. | 0.628 |
sce2895 | sce2896 | sce2895 | sce2896 | Hypothetical protein predicted by Glimmer/Critica. | Putative membrane protein. | 0.714 |
sce2896 | sce2894 | sce2896 | sce2894 | Putative membrane protein. | Putetive secreted protein. | 0.585 |
sce2896 | sce2895 | sce2896 | sce2895 | Putative membrane protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.714 |
sce4315 | sce2894 | sce4315 | sce2894 | Biopolymer transport protein, putative; Specificity unclear. | Putetive secreted protein. | 0.400 |
tolQ1 | aglR1 | sce0649 | sce2993 | Putative transport transmembrane protein, tolQ; High confidence in function and specificity. | Adventurous gliding motility protein R; Family membership. | 0.571 |
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