STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoBPhosphate regulon transcriptional regulatory protein phoB; High confidence in function and specificity. (231 aa)    
Predicted Functional Partners:
phoR1
Phosphate sensory box histidine kinase PhoR; High confidence in function and specificity.
 0.996
sce3423
Sensory box histidine kinase similar to PhoR; Family membership.
 0.984
sce2435
Putative sensor kinase; Family membership.
 
  0.981
sce0516
Two-component sensor histidine kinase; Family membership.
 
  0.977
sce7574
Two-component system response regulator; Family membership.
  
  
 
0.925
sce5073
DNA-binding response regulator; Family membership.
  
  
 
0.902
sce1189
Two-component histidine kinase; Family membership.
 
 0.854
sce2050
Sensor histidine kinase; Family membership.
 
 
 0.827
sce6354
Two-component system histidine kinase; Family membership.
 
 
 0.827
sce3287
Sensor histidine kinase; Family membership.
 
 0.820
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.