Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce3123Protein kinase; Family membership. (1375 aa)    
Predicted Functional Partners:
sce2320
Protein kinase; Family membership.
  
     0.735
sce2548
Hypothetical protein.
  
     0.718
sce0703
Hypothetical protein.
  
     0.717
sce8140
Hypothetical protein predicted by Glimmer/Critica.
  
     0.716
sce5929
Hypothetical protein.
  
     0.713
sce4535
Hypothetical protein predicted by Glimmer/Critica.
  
     0.697
sce0609
Hypothetical protein; FOG: TPR repeat.
  
     0.691
sce9355
Cellulose synthase 1 operon protein C precursor.
  
     0.691
sce7189
Putative exported alanine/arginine/valine-rich protein.
  
     0.683
sce7690
Hypothetical protein.
  
     0.683
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.