STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3182Putative beta-ketoacyl synthase; Family membership; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (410 aa)    
Predicted Functional Partners:
chiA
Putative acyltransferase/oxidoreductase; Specificity unclear.
 
  
 0.954
sce3181
Probable Hydroxymethylglutaryl-CoA synthase.
 
 
 0.922
sce3180
Probable enoyl-CoA hydratase/isomerase; Family membership.
 
 
 0.908
sce3179
Putative polyketide biosynthesis enoyl-coa hydratase; Family membership; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
  0.898
fabD3
Malonyl CoA-acyl carrier protein transacylase; Family membership.
 
  
 0.895
sce3184
Hypothetical protein; Function unclear.
 
  
 0.892
sce3195
Malonyl CoA-acyl carrier protein transacylase; Family membership.
 
  
 0.884
fabD1
Malonyl CoA-acyl carrier protein transacylase; High confidence in function and specificity.
 
  
 0.882
fabD2
[Acyl-carrier-protein] S-malonyltransferase; Family membership.
  
 0.878
acpP3
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
 
 
 0.878
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.