STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
sce3277Putative Esterase; Esterase with broad substrate specificity, that may be involved in degradation of plant biomass present in the habitat of S.cellulosum. In vitro, displays acetyl esterase activity, aryl esterase activity, paraben esterase activity, carboxyl esterase activity, poly-3-hydroxybutyric acid (PHB) depolymerase activity, and a low feruloyl esterase activity. Does not possess any paraoxonase activity. Is able to bind to multiple substrate molecules simultaneously. (456 aa)    
Predicted Functional Partners:
sce3276
Esterase/lipase/thioesterase family protein; Family membership.
 
     0.841
xysA
Endo-1,4-beta-xylanase; High confidence in function and specificity.
 
 
   0.821
sce6693
O-Glycosyl hydrolase; Specificity unclear.
 
 
   0.813
sce7850
Alpha-L-arabinofuranosidase precursor; Family membership.
  
 
   0.788
sce7853
Exported O-glycosyl hydrolase; Family membership.
  
 
   0.788
abfB
Alpha-L-arabinofuranosidase precursor; High confidence in function and specificity.
  
 
   0.787
cbhA
Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6.
  
     0.775
sce0998
Hypothetical protein predicted by Glimmer/Critica.
  
     0.774
sce2175
PE_PGRS family protein.
  
     0.774
sce2212
Putative topoisomerase; Family membership.
  
     0.774
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.