STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ethAMonooxygenase, flavin-binding family; High confidence in function and specificity. (504 aa)    
Predicted Functional Partners:
sce9229
Putative esterase/lipase; Family membership.
  
 0.898
sce3726
Hypothetical protein.
  
   
 0.728
atpA
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
   0.648
sce5500
Hypothetical protein.
  
     0.560
sce5974
Putative dienelactone hydrolase.
 
    0.556
nos
Nitric-oxide synthase, oxygenase subunit; Family membership.
   
 
 0.530
sce0547
Cation efflux system protein; High confidence in function and specificity.
  
    0.520
czcD
Cation efflux family protein; High confidence in function and specificity.
  
    0.520
sce7772
Carboxylesterase.
  
     0.478
gst19
Gst19 protein; Family membership.
  
   
 0.471
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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