STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3288Two-component response regulator; Family membership. (256 aa)    
Predicted Functional Partners:
sce3287
Sensor histidine kinase; Family membership.
 
 0.963
sce6354
Two-component system histidine kinase; Family membership.
 
 
 0.784
sce3289
Hypothetical protein predicted by Glimmer/Critica.
       0.773
sce2051
Two component response regulator; Family membership.
  
     0.750
sce5907
Response regulatory domain-containing protein; Unnamed protein product; Family membership.
  
     0.743
sce2656
Two-component response regulator.
  
     0.740
sce4827
Unnamed protein product; Family membership.
 
 0.740
sce2050
Sensor histidine kinase; Family membership.
 
 
 0.739
sce0012
Response regulator; Family membership.
  
     0.737
sce0429
Two-component response regulator; Family membership.
  
     0.729
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.