Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce3434Hypothetical protein. (280 aa)    
Predicted Functional Partners:
sce3435
Hypothetical protein; Function unclear; Belongs to the UPF0276 family.
  
 0.977
sce7706
Uncharacterized protein conserved in bacteria.
  
 0.938
sce6052
Uncharacterized protein conserved in bacteria.
  
 0.932
sce1885
Uncharacterized protein conserved in bacteria.
 
  
 0.928
sce0141
Uncharacterized protein conserved in bacteria.
 
  
 0.927
sce3433
Hypothetical protein; Function unclear.
       0.773
sce1869
Predicted membrane protein.
 
  
 0.691
sce0770
Putative membrane protein.
  
  
 0.561
sce2760
Predicted membrane protein.
  
  
 0.561
sce1909
Hypothetical protein.
  
     0.550
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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