STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3449Alpha-glucosidase family protein; Family membership; Belongs to the glycosyl hydrolase 31 family. (802 aa)    
Predicted Functional Partners:
bglX
Beta-glucosidase.
 
  
 0.944
bglA4
Beta-glucosidase; High confidence in function and specificity.
 
  
 0.935
sce6897
Fn3_like domain-containing protein; Unnamed protein product; Family membership.
 
  
 0.930
treS
Trehalose synthase; High confidence in function and specificity.
 
  
 0.927
sce3064
Alpha amylase, catalytic region; Family membership.
 
  
 0.924
cbpA
CbpA protein; High confidence in function and specificity.
  
  
 0.919
sce0768
Putative Glucoamylase precursor (Glucan 14-alpha-glucosidase) (14-alpha-D-glucan glucohydrolase); Family membership.
  
 
 0.917
cga1
Glucan 1,4-alpha-glucosidase; High confidence in function and specificity.
  
 
 0.917
cga2
Glucan 1,4-alpha-glucosidase; High confidence in function and specificity.
  
 
 0.917
bglA1
Beta-glucosidase; High confidence in function and specificity.
  
 0.913
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.