STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bolABolA-like protein; High confidence in function and specificity; Belongs to the BolA/IbaG family. (158 aa)    
Predicted Functional Partners:
sce6471
Glutaredoxin-like protein.
  
 
 0.913
sce2979
COG: Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.874
sce3462
Hypothetical protein predicted by Glimmer/Critica.
       0.773
sce3464
Putative phosphoesterase.
       0.738
sce0096
Uncharacterized protein conserved in bacteria.
  
    0.655
dps
Probable DNA-binding stress protein, Dps family; High confidence in function and specificity; Belongs to the Dps family.
   
  
 0.566
sce7884
Hypothetical DNA-binding ferritin-like protein,Dps family; Family membership; Belongs to the Dps family.
   
  
 0.566
sce2393
Hypothetical protein predicted by Glimmer/Critica.
  
     0.542
sce0905
Putative peroxiredoxin 2 family protein/glutaredoxin; Family membership.
 
 
 0.540
sce0093
Hypothetical protein predicted by Glimmer/Critica; Belongs to the Dps family.
   
  
 0.526
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.