STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3487Hypothetical protein predicted by Glimmer/Critica. (114 aa)    
Predicted Functional Partners:
hycG
NAD-dependent dehydrogenase subunit.
  
 
 0.976
narB1
Ferredoxin--nitrate reductase; Family membership; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
      0.900
nuoF
NADH dehydrogenase (ubiquinone); High confidence in function and specificity.
  
 
 0.895
nuoE
NADH dehydrogenase (ubiquinone); High confidence in function and specificity.
  
 
 0.890
cbiX
Sirohydrochlorin cobaltochelatase; Function unclear.
  
 
 0.840
narB2
Nitrate reductase; Family membership; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
      0.818
sce9225
Unnamed protein product; Specificity unclear.
  
 
 0.813
yeiA
Dihydropyrimidine dehydrogenase; Family membership.
  
 
 0.811
nirB1
Nitrite reductase; High confidence in function and specificity; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.802
sce5732
Hypothetical protein; Ferredoxin.
  
 
 0.785
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.