STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltPProton glutamate symport protein; High confidence in function and specificity; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (418 aa)    
Predicted Functional Partners:
cstA
Carbon starvation protein A; High confidence in function and specificity.
 
  
 0.617
sce0357
Hypothetical protein predicted by Glimmer/Critica; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.524
sce3538
Protein kinase; Family membership.
       0.509
sdhC2
Succinate dehydrogenase; High confidence in function and specificity.
  
  
 0.502
sce3536
Hypothetical protein predicted by Glimmer/Critica.
       0.493
pabB
Para-aminobenzoate synthase; High confidence in function and specificity.
     
 0.444
trpE
Anthranilate synthase; High confidence in function and specificity.
     
 0.444
pdhC
Dihydrolipoyllysine-residue acetyltransferase; High confidence in function and specificity.
    
 0.434
aceF1
Dihydrolipoyllysine-residue acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.434
aceF2
Dihydrolipoyllysine-residue acetyltransferase; Family membership.
    
 0.434
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.