Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce3591Amino-acid acetyltransferase; High confidence in function and specificity. (198 aa)    
Predicted Functional Partners:
sce4991
FHA domain protein.
  
     0.638
sce3022
Hypothetical protein.
  
     0.629
sce3873
WD-repeat protein.
  
     0.618
sce6077
Hypothetical protein predicted by Glimmer/Critica.
  
     0.585
sce3590
Hypothetical protein.
       0.565
sce0703
Hypothetical protein.
  
     0.549
sce9355
Cellulose synthase 1 operon protein C precursor.
  
     0.548
sce6521
Posible heat shock protein.
  
   
 0.529
argB2
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 0.525
sce4888
Probable glycolipid synthase; Family membership.
 
 
 
 0.524
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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