STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce3598Unnamed protein product; Family membership. (545 aa)    
Predicted Functional Partners:
sce8135
Two component hybrid sensor kinase/response regulator; Family membership.
 
0.957
sce3940
Sensory box histidine kinase/response regulator hybrid; Family membership.
 
0.951
sce0206
Two-component system sensor histidine kinase/response regulator, hybrid ('one-component system'); Family membership.
 
0.924
sce3507
Two-component hybrid sensor and regulator; Family membership.
 
0.870
sce6826
Two-component hybrid sensor and regulator; Family membership.
 
 
0.870
sce1346
Hybrid histidine kinase; Family membership.
 
 
 0.849
sce7217
Unnamed protein product; Family membership.
  
 
 0.847
sce4548
Two-component hybrid sensor and regulator; Family membership.
 
 
0.843
sce1260
Two-component hybrid sensor and regulator; Family membership.
 
0.841
sce0713
Two-component hybrid sensor and regulator.
 
0.829
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.