Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pssA2Phosphatidylserine synthase; High confidence in function and specificity; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (224 aa)    
Predicted Functional Partners:
sce9033
Putative phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
 0.961
sce2811
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Family membership; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.928
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.926
pssA1
PssA1 protein; Family membership; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 
0.926
cdsA
Phosphatidate cytidylyltransferase; Family membership.
    
 0.921
serB
SerB protein; High confidence in function and specificity.
    
  0.906
sce0438
Cystathionine beta-synthase; High confidence in function and specificity.
     
  0.900
sce0442
Serine-pyruvate aminotransferase; Family membership.
     
  0.900
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
  0.900
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
  0.900
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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