sce3644 protein (Sorangium cellulosum So ce56)

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sce3644

Hypothetical protein predicted by Glimmer/Critica. (258 aa)

Predicted Functional Partners:

rpoB

0.783

rpoC

0.750

rpoA

0.736

rpoZ

0.730

sce1704

0.715

dnaG

0.596

sce3645

0.581

sce5855

0.487

sce5957

0.487

lysS

0.433

Your Current Organism:

Sorangium cellulosum So ce56

NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dnaG	rpoA	sce4446	sce7936	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.522
dnaG	rpoB	sce4446	sce0410	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.484
dnaG	sce3644	sce4446	sce3644	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Hypothetical protein predicted by Glimmer/Critica.	0.596
lysS	rpoA	sce1634	sce7936	Lysine--tRNA ligase; Family membership; Belongs to the class-II aminoacyl-tRNA synthetase family.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.662
lysS	rpoB	sce1634	sce0410	Lysine--tRNA ligase; Family membership; Belongs to the class-II aminoacyl-tRNA synthetase family.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.709
lysS	rpoC	sce1634	sce0411	Lysine--tRNA ligase; Family membership; Belongs to the class-II aminoacyl-tRNA synthetase family.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.556
lysS	rpoZ	sce1634	sce7258	Lysine--tRNA ligase; Family membership; Belongs to the class-II aminoacyl-tRNA synthetase family.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.468
lysS	sce3644	sce1634	sce3644	Lysine--tRNA ligase; Family membership; Belongs to the class-II aminoacyl-tRNA synthetase family.	Hypothetical protein predicted by Glimmer/Critica.	0.433
rpoA	dnaG	sce7936	sce4446	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.522
rpoA	lysS	sce7936	sce1634	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Lysine--tRNA ligase; Family membership; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.662
rpoA	rpoB	sce7936	sce0410	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoC	sce7936	sce0411	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoZ	sce7936	sce7258	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.995
rpoA	sce1704	sce7936	sce1704	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative transcription factor; Specificity unclear.	0.896
rpoA	sce3644	sce7936	sce3644	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Hypothetical protein predicted by Glimmer/Critica.	0.736
rpoA	sce5855	sce7936	sce5855	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative secreted protein.	0.775
rpoA	sce5957	sce7936	sce5957	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA helicase; Unnamed protein product; Hypothetical protein.	0.825
rpoB	dnaG	sce0410	sce4446	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.484
rpoB	lysS	sce0410	sce1634	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Lysine--tRNA ligase; Family membership; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.709
rpoB	rpoA	sce0410	sce7936	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998

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