STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3693Putative transport protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (581 aa)    
Predicted Functional Partners:
sce6165
Putative membrane protein.
  
    0.734
kefC
Glutathione-regulated potassium-efflux system protein KefC; High confidence in function and specificity; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
0.633
sce3692
Probable glutathione S-transferase; High confidence in function and specificity.
       0.515
sce2508
Putative cation/hydrogen exchanger; Specificity unclear.
 
  
0.500
mnhG
Na+/H+ antiporter; Family membership.
     
 0.459
sce0124
Putative sodium:solute transport protein; Specificity unclear.
     
 0.447
sce4348
Sodium/hydrogen exchanger family protein.
  
  
 0.432
kefX
Putative potassium-efflux system protein, Kef-family; Family membership.
  
  
 0.432
kup
Potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.
 
   
 0.421
sce8455
Putative NAD(P)H dehydrogenase; Function unclear.
   
 
 0.411
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.