Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
sce3697ABC transporter ATP-binding protein; Family membership. (246 aa)    
Predicted Functional Partners:
sce3698
Putative ABC-type organic solvent resistance transport system substrate-binding protein.
 
 0.990
sce8301
Putative ABC transport system permease protein; Family membership.
 0.990
sce0613
Putative ABC transporter permease protein; Specificity unclear.
 
 0.989
sce3695
Putative ABC transport system permease protein.
 
 0.989
sce3696
Putative ABC transport system permease protein.
 
 0.989
sce7646
ABC-type organic solvent transporter, solute-binding periplasmic protein.
 
 0.981
sce4478
Putative ABC transport system substrate-binding protein.
 
 0.960
sce6248
Hypothetical protein; ABC-type transport system involved in resistance to organic solvents auxiliary component.
  
 
 0.860
rpsI
30S ribosomal protein S9; High confidence in function and specificity; Belongs to the universal ribosomal protein uS9 family.
  
     0.444
nuoA1
NADH dehydrogenase (ubiquinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
    0.443
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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