rsbT3 protein (Sorangium cellulosum So ce56)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

rsbT3

Protein kinase; Specificity unclear. (209 aa)

Predicted Functional Partners:

rsbX2

0.976

sce3740

0.972

rsbX1

0.899

sce9207

0.895

rsbR1

0.879

rsbS

0.878

sce4899

0.875

sce4634

0.869

sce3504

0.868

rsbR2

0.868

Your Current Organism:

Sorangium cellulosum So ce56

NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rsbR1	rsbS	sce1782	sce3612	Positive regulator of sigma-B.	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	0.772
rsbR1	rsbT3	sce1782	sce3742	Positive regulator of sigma-B.	Protein kinase; Specificity unclear.	0.879
rsbR1	rsbX1	sce1782	sce3610	Positive regulator of sigma-B.	Phosphoserine phosphatase; High confidence in function and specificity.	0.837
rsbR1	rsbX2	sce1782	sce3741	Positive regulator of sigma-B.	Phosphoserine phosphatase rsbX; High confidence in function and specificity.	0.833
rsbR1	sce4899	sce1782	sce4899	Positive regulator of sigma-B.	Anti-anti sigma factor protein.	0.432
rsbR1	sce9207	sce1782	sce9207	Positive regulator of sigma-B.	Unnamed protein product; Hypothetical protein.	0.513
rsbR2	rsbS	sce3613	sce3612	Positive regulator of sigma-B activity; High confidence in function and specificity.	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	0.946
rsbR2	rsbT3	sce3613	sce3742	Positive regulator of sigma-B activity; High confidence in function and specificity.	Protein kinase; Specificity unclear.	0.868
rsbR2	rsbX1	sce3613	sce3610	Positive regulator of sigma-B activity; High confidence in function and specificity.	Phosphoserine phosphatase; High confidence in function and specificity.	0.961
rsbR2	rsbX2	sce3613	sce3741	Positive regulator of sigma-B activity; High confidence in function and specificity.	Phosphoserine phosphatase rsbX; High confidence in function and specificity.	0.835
rsbS	rsbR1	sce3612	sce1782	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	Positive regulator of sigma-B.	0.772
rsbS	rsbR2	sce3612	sce3613	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	Positive regulator of sigma-B activity; High confidence in function and specificity.	0.946
rsbS	rsbT3	sce3612	sce3742	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	Protein kinase; Specificity unclear.	0.878
rsbS	rsbX1	sce3612	sce3610	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	Phosphoserine phosphatase; High confidence in function and specificity.	0.961
rsbS	rsbX2	sce3612	sce3741	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	Phosphoserine phosphatase rsbX; High confidence in function and specificity.	0.839
rsbS	sce3504	sce3612	sce3504	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	Anti-anti sigma factor protein; Specificity unclear.	0.775
rsbS	sce4634	sce3612	sce4634	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	Anti-anti sigma factor protein; Specificity unclear.	0.819
rsbS	sce4899	sce3612	sce4899	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	Anti-anti sigma factor protein.	0.774
rsbS	sce9207	sce3612	sce9207	Highly similar to negative regulation of sigma-B activity; High confidence in function and specificity.	Unnamed protein product; Hypothetical protein.	0.776
rsbT3	rsbR1	sce3742	sce1782	Protein kinase; Specificity unclear.	Positive regulator of sigma-B.	0.879

page 1 of 4

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Textmining

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About