STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3753Hypothetical protein; Cytochrome c mono- and diheme variants. (147 aa)    
Predicted Functional Partners:
sce7592
Putative Cytochrome-c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.963
sce4516
Putative oxidoreductase, iron-sulfur binding; Family membership.
  
 
 0.928
hmoA
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
 
 0.928
sce2646
Oxidoreductase; Specificity unclear.
  
 
 0.884
petB
Cytochrome b6.
  
 
 0.870
sce3754
Hypothetical protein predicted by Glimmer/Critica.
       0.773
sce4525
Putative Cytochrome-c oxidase; Family membership.
  
 
 0.711
sce7594
Putative Cytochrome-c oxidase; Family membership.
  
 
 0.711
napG
Putative ferredoxin; Family membership.
  
  
 0.529
norB
Nitric oxide reductase; High confidence in function and specificity.
  
 
 0.510
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.