STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3773Phosphoesterase; Family membership. (510 aa)    
Predicted Functional Partners:
phlC1
PhlC1 protein; High confidence in function and specificity.
  
  
 
0.927
phlC2
Phosphoesterase precursor; High confidence in function and specificity.
  
  
 
0.921
sce5110
Cardiolipin synthetase; Family membership.
     
 0.904
sce6512
CDP-diacylglycerol--serine O-phosphatidyltransferase.
     
 0.904
sce9033
Putative phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
 0.903
sce8208
CDP-diacylglycerol--serine O-phosphatidyltransferase.
     
 0.902
suhB
Inositol-phosphate phosphatase; High confidence in function and specificity; Belongs to the inositol monophosphatase superfamily.
     
  0.900
sce9262
Hypothetical protein.
     
 0.900
pssA1
PssA1 protein; Family membership; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.800
pssA2
Phosphatidylserine synthase; High confidence in function and specificity; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.800
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.