Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce3804Putative ATP/GTP-binding protein. (353 aa)    
Predicted Functional Partners:
sce0486
Hypothetical protein; FOG: TPR repeat.
 
     0.737
sce3805
Hypothetical protein.
 
     0.710
sce7021
Hypothetical protein/putative endoglucanase; Function unclear.
  
     0.679
sce8862
BKRF1 encodes EBNA-1 protein, latent cycle gene.
  
     0.674
sce7850
Alpha-L-arabinofuranosidase precursor; Family membership.
  
     0.637
sce7853
Exported O-glycosyl hydrolase; Family membership.
  
     0.634
sce8759
Conserved hypothetical protein with Apaf-1 domain.
  
     0.621
sce1440
Putative terpene cyclase; Family membership.
  
     0.603
sce3623
Hypothetical protein; FOG: WD40 repeat.
 
 0.596
abfB
Alpha-L-arabinofuranosidase precursor; High confidence in function and specificity.
  
     0.593
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.