Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gmk | ndk | sce3762 | sce2949 | Putative Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.930 |
| gmk | pyk | sce3762 | sce4540 | Putative Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Pyruvate kinase; High confidence in function and specificity; Belongs to the pyruvate kinase family. | 0.932 |
| gmk | rel | sce3762 | sce3845 | Putative Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.929 |
| gmk | sce5197 | sce3762 | sce5197 | Putative Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Put. Pyruvate kinase; Family membership; Belongs to the pyruvate kinase family. | 0.922 |
| gmk | sce6063 | sce3762 | sce6063 | Putative Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Hypothetical protein predicted by Glimmer/Critica; Specificity unclear. | 0.924 |
| mazG | ndk | sce4803 | sce2949 | Hypothetical protein; Family membership. | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.900 |
| mazG | pyk | sce4803 | sce4540 | Hypothetical protein; Family membership. | Pyruvate kinase; High confidence in function and specificity; Belongs to the pyruvate kinase family. | 0.900 |
| mazG | rel | sce4803 | sce3845 | Hypothetical protein; Family membership. | GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.931 |
| mazG | sce3998 | sce4803 | sce3998 | Hypothetical protein; Family membership. | Unnamed protein product; Family membership. | 0.900 |
| mazG | sce5197 | sce4803 | sce5197 | Hypothetical protein; Family membership. | Put. Pyruvate kinase; Family membership; Belongs to the pyruvate kinase family. | 0.900 |
| mazG | sce6063 | sce4803 | sce6063 | Hypothetical protein; Family membership. | Hypothetical protein predicted by Glimmer/Critica; Specificity unclear. | 0.475 |
| ndk | gmk | sce2949 | sce3762 | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Putative Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.930 |
| ndk | mazG | sce2949 | sce4803 | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Hypothetical protein; Family membership. | 0.900 |
| ndk | pyk | sce2949 | sce4540 | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Pyruvate kinase; High confidence in function and specificity; Belongs to the pyruvate kinase family. | 0.911 |
| ndk | rel | sce2949 | sce3845 | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.920 |
| ndk | rpsF | sce2949 | sce6937 | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.995 |
| ndk | sce3998 | sce2949 | sce3998 | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Unnamed protein product; Family membership. | 0.916 |
| ndk | sce5197 | sce2949 | sce5197 | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Put. Pyruvate kinase; Family membership; Belongs to the pyruvate kinase family. | 0.911 |
| ndk | sce6063 | sce2949 | sce6063 | Putative Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Hypothetical protein predicted by Glimmer/Critica; Specificity unclear. | 0.919 |
| ppx1 | ppx2 | sce1705 | sce5606 | Ppx1 protein; High confidence in function and specificity. | Ppx2 protein; High confidence in function and specificity. | 0.928 |
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