Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sce3855CDP-alcohol phosphatidyltransferase family protein; Family membership; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (332 aa)    
Predicted Functional Partners:
cinA
Competence-damage inducible protein CinA homolog; High confidence in function and specificity; Belongs to the CinA family.
  
  
 0.851
sce0424
Hypothetical protein.
  
   0.678
sce1678
Uncharacterized protein conserved in bacteria.
  
    0.646
sce1804
Myo-inositol 1-phosphate synthase A1; Family membership.
 
   
 0.615
folD1
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.468
folD2
Methylenetetrahydrofolate dehydrogenase (NAD(+)); Family membership.
  
  
 0.468
sce5828
Monooxygenase family protein; Family membership.
  
     0.427
sce6491
moaA/nifB/pqqE family protein.
  
     0.422
sce6488
Putative competence-damage associated protein.
  
  
 0.413
nnrE
ADP-dependent (S)-NAD(P)H-hydrate dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to all [...]
  
  
 0.410
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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