Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mxcC2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; High confidence in function and specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)    
Predicted Functional Partners:
mxcF
Isochorismatase; High confidence in function and specificity.
 
 0.995
mxcE
(2,3-dihydroxybenzoyl)adenylate synthase; High confidence in function and specificity.
 
 0.989
mxcD
MxcD protein; High confidence in function and specificity.
 
  
 0.861
mxcB
Iron utilization protein; Family membership.
 
     0.853
sce6685
SDR family short chain oxidoreductase; Specificity unclear; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.770
mxcG
Nonribosomal peptide synthetase; High confidence in function and specificity.
 
 
 0.743
sce2387
Non-ribosomal peptide synthetase; Family membership.
 
 
 0.692
sce5788
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.682
sce0047
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; High confidence in function and specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.668
sce8262
Non-ribosomal peptide synthetase; Family membership.
 
 
 0.595
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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