STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3963Putative ABC transport system ATP-binding protein; Family membership. (245 aa)    
Predicted Functional Partners:
sce8301
Putative ABC transport system permease protein; Family membership.
 0.990
sce0613
Putative ABC transporter permease protein; Specificity unclear.
 
 0.989
sce3695
Putative ABC transport system permease protein.
 
 0.989
sce3696
Putative ABC transport system permease protein.
 
 0.989
sce3698
Putative ABC-type organic solvent resistance transport system substrate-binding protein.
 
 0.978
sce7646
ABC-type organic solvent transporter, solute-binding periplasmic protein.
 
 0.977
sce4478
Putative ABC transport system substrate-binding protein.
 
 0.962
sce8566
ABC transporter ATP-binding protein; Family membership; Belongs to the ABC transporter superfamily.
 
     
0.897
sce6248
Hypothetical protein; ABC-type transport system involved in resistance to organic solvents auxiliary component.
  
 
 0.857
sce3962
Hypothetical protein.
       0.559
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.