Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce3988Unnamed protein product; Family membership. (335 aa)    
Predicted Functional Partners:
sce1346
Hybrid histidine kinase; Family membership.
 
 0.964
sce3710
Sensory box/GGDEF family protein.
 
  
 0.955
sce7776
Two-component hybrid histidine kinase; Family membership.
 
0.954
sce2902
GGDEF domain protein.
    0.936
sce8626
FHA domain protein.
 
    0.930
sce2546
Putative regulatory protein.
 
0.921
sce7214
Two component sensor kinase; Family membership.
 
   0.914
sce0723
Two-component hybrid sensor and regulator; Family membership.
 
 0.908
sce0385
Two-component sensor histidine kinase; Family membership.
 
   0.899
sce2312
Two-component hybrid sensor and regulator; Family membership.
 
 0.886
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.