STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4008Hypothetical protein. (452 aa)    
Predicted Functional Partners:
sce8443
Probable chitinase.
 
  
 0.942
sce4292
Put. Beta-glucosidase; Family membership.
     
  0.900
sce6074
Hypothetical protein; Predicted glycosyl hydrolase; Belongs to the glycosyl hydrolase 18 family.
     
  0.900
sce8514
Hypothetical protein; Predicted phosphotransferase related to Ser/Thr protein kinases.
     
  0.900
sce2097
GPW_gp25 domain-containing protein; Unnamed protein product; Hypothetical protein.
  
    0.823
sce2242
Putative hydrolase.
  
     0.764
sce2398
Hypothetical protein.
  
    0.761
sce4006
Bacterial type 3a, cellulose-binding domain; Family membership.
  
     0.740
sce2094
Hypothetical protein.
  
  
 0.705
sce2085
Hypothetical protein.
  
    0.601
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.