Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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sce4023Putative uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. (281 aa)    
Predicted Functional Partners:
yedX
Transthyretin-related protein; Family membership; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
 0.986
alc
Putative Allantoicase; Family membership; Belongs to the allantoicase family.
 
  
 0.886
allB
Allantoinase; Family membership.
 
  
 0.818
sce5882
Hypothetical protein.
 
     0.779
sce4022
Anti-anti sigma factor protein; Specificity unclear.
       0.651
pucI
Putative Allantoin permease.
 
  
 0.542
sce0442
Serine-pyruvate aminotransferase; Family membership.
 
  
 0.531
ygfP
Putative guanine deaminase; Family membership.
 
  
 0.505
sce3561
PE-PGRS family protein.
  
     0.487
sce4024
Putative cobalamin binding protein.
       0.480
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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