STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4041Hypothetical protein. (313 aa)    
Predicted Functional Partners:
sce6761
Hypothetical protein.
  
     0.775
sce9290
Hypothetical protein.
  
     0.774
sce4040
Putative secreted protein.
       0.773
sce4039
Hypothetical protein.
       0.737
sce2816
Hypothetical protein.
  
     0.731
sce2561
Hypothetical protein.
  
     0.650
sce4329
Hypothetical protein.
  
     0.562
sce4038
Hypothetical protein predicted by Glimmer/Critica.
       0.438
sce3594
Hypothetical protein; Putative Arylsulfatase A and related enzymes.
 
   0.430
sce7789
Sulfatase family protein; Family membership.
  
 
   0.419
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.