Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce4046Probable Lipase. (394 aa)    
Predicted Functional Partners:
sce0941
Calcineurin-like phosphoesterase family protein; Family membership.
  
     0.624
sce5477
Hypothetical protein predicted by Glimmer/Critica.
  
     0.624
sce8919
Putative exported protein.
  
     0.582
sce2189
Hypothetical protein.
  
     0.555
sce4411
Putative secreted protein.
  
     0.538
sce0153
Putative secreted protein.
  
     0.523
gst10
Glutathione S-transferase, putative; High confidence in function and specificity; Belongs to the GST superfamily.
  
     0.519
dnaJ
DnaJ domain; Family membership.
  
     0.504
sce4045
Hypothetical protein predicted by Glimmer/Critica.
       0.482
sce2216
Unknown protein.
  
     0.456
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.