STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4100Probable secreted esterase. (391 aa)    
Predicted Functional Partners:
sce7850
Alpha-L-arabinofuranosidase precursor; Family membership.
  
 
   0.583
sce7853
Exported O-glycosyl hydrolase; Family membership.
  
 
   0.581
sce5172
Putative secreted protein.
  
     0.544
sce4005
Glycosyl hydrolases family 11 member; Family membership; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.537
pelB
PelB protein; High confidence in function and specificity.
  
     0.524
sce4101
Put. Polysaccharide deacetylase; Family membership.
       0.517
pelA
PelA protein; High confidence in function and specificity.
  
     0.514
sce1511
Putative esterase/lipase/thioesterase.
  
     0.510
sce2869
Putative secreted protein; Family membership; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.501
abfB
Alpha-L-arabinofuranosidase precursor; High confidence in function and specificity.
  
 
   0.500
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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