Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sce4284Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase. (421 aa)    
Predicted Functional Partners:
galE4
GalE4 protein; High confidence in function and specificity.
 
    0.939
sce4259
Hypothetical protein.
 
    0.769
sce5953
Probable anion transporter ATPase; Function unclear.
  
     0.760
sce6496
Epimerase domain-containing protein; Unnamed protein product; Family membership.
 
    0.581
sce8296
Probable Anion-transporting ATPase; Family membership.
  
     0.568
truB
Probable tRNA pseudouridine 55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.561
sce2255
Hypothetical protein.
  
     0.548
cdsA
Phosphatidate cytidylyltransferase; Family membership.
    
 0.548
sce8687
Hypothetical protein; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
   0.520
sce4282
Hypothetical protein.
       0.514
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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