Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hutIImidazolonepropionase; High confidence in function and specificity; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (427 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.998
sdeB
Putative chlorohydrolase.
 
 
 0.975
hutH
Histidine ammonia-lyase; High confidence in function and specificity; Belongs to the PAL/histidase family.
 
  
 0.968
sce4428
N-formylglutamate amidohydrolase.
  
  
 0.792
sce4935
Predicted N-formylglutamate amidohydrolase; Family membership.
  
  
 0.792
sce4292
Put. Beta-glucosidase; Family membership.
       0.788
sce4290
Transcriptional accessory protein.
       0.626
adh4
Alcohol dehydrogenase; High confidence in function and specificity.
       0.488
speB1
Agmatinase; Family membership; Belongs to the arginase family.
  
  
 0.458
sce4400
Putative agmatinase; Family membership; Belongs to the arginase family.
  
  
 0.458
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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