Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ntcA | sce2782 | sce3757 | sce2782 | Global nitrogen regulatory protein, CRP family of transcriptional regulators. | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.765 |
ntcA | sce4318 | sce3757 | sce4318 | Global nitrogen regulatory protein, CRP family of transcriptional regulators. | cAMP-binding protein Probable transcriptional regulatory protein; Specificity unclear. | 0.706 |
ntcA | sce8187 | sce3757 | sce8187 | Global nitrogen regulatory protein, CRP family of transcriptional regulators. | cAMP-dependent protein kinase regulatory subunit; Family membership. | 0.688 |
sce0032 | sce1676 | sce0032 | sce1676 | CRP family of transcriptional regulators. | Cyclic nucleotide binding protein. | 0.976 |
sce0032 | sce2782 | sce0032 | sce2782 | CRP family of transcriptional regulators. | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.975 |
sce0032 | sce4318 | sce0032 | sce4318 | CRP family of transcriptional regulators. | cAMP-binding protein Probable transcriptional regulatory protein; Specificity unclear. | 0.965 |
sce0032 | sce7185 | sce0032 | sce7185 | CRP family of transcriptional regulators. | cAMP-binding protein, CRP family of transcriptional regulators; Family membership. | 0.919 |
sce0032 | sce8187 | sce0032 | sce8187 | CRP family of transcriptional regulators. | cAMP-dependent protein kinase regulatory subunit; Family membership. | 0.960 |
sce1501 | sce1676 | sce1501 | sce1676 | Putative adenylate/guanylate cyclase. | Cyclic nucleotide binding protein. | 0.568 |
sce1501 | sce2782 | sce1501 | sce2782 | Putative adenylate/guanylate cyclase. | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.699 |
sce1501 | sce4318 | sce1501 | sce4318 | Putative adenylate/guanylate cyclase. | cAMP-binding protein Probable transcriptional regulatory protein; Specificity unclear. | 0.773 |
sce1501 | sce8187 | sce1501 | sce8187 | Putative adenylate/guanylate cyclase. | cAMP-dependent protein kinase regulatory subunit; Family membership. | 0.795 |
sce1676 | sce0032 | sce1676 | sce0032 | Cyclic nucleotide binding protein. | CRP family of transcriptional regulators. | 0.976 |
sce1676 | sce1501 | sce1676 | sce1501 | Cyclic nucleotide binding protein. | Putative adenylate/guanylate cyclase. | 0.568 |
sce1676 | sce1725 | sce1676 | sce1725 | Cyclic nucleotide binding protein. | Putative adenylate cyclase. | 0.548 |
sce1676 | sce2782 | sce1676 | sce2782 | Cyclic nucleotide binding protein. | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.922 |
sce1676 | sce4318 | sce1676 | sce4318 | Cyclic nucleotide binding protein. | cAMP-binding protein Probable transcriptional regulatory protein; Specificity unclear. | 0.924 |
sce1676 | sce6986 | sce1676 | sce6986 | Cyclic nucleotide binding protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.568 |
sce1676 | sce7185 | sce1676 | sce7185 | Cyclic nucleotide binding protein. | cAMP-binding protein, CRP family of transcriptional regulators; Family membership. | 0.928 |
sce1676 | sce7616 | sce1676 | sce7616 | Cyclic nucleotide binding protein. | Adenylate cyclase; Family membership. | 0.585 |
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