STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4318cAMP-binding protein Probable transcriptional regulatory protein; Specificity unclear. (157 aa)    
Predicted Functional Partners:
sce7185
cAMP-binding protein, CRP family of transcriptional regulators; Family membership.
  
  
  0.970
sce0032
CRP family of transcriptional regulators.
  
  
 0.965
sce8187
cAMP-dependent protein kinase regulatory subunit; Family membership.
  
  
0.928
sce1676
Cyclic nucleotide binding protein.
  
  
 
0.924
sce2782
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
  
 
0.923
sce7616
Adenylate cyclase; Family membership.
 
 
 0.791
sce1725
Putative adenylate cyclase.
  
 
  0.774
sce1501
Putative adenylate/guanylate cyclase.
  
 
  0.773
sce6986
Hypothetical protein predicted by Glimmer/Critica.
  
 
  0.773
ntcA
Global nitrogen regulatory protein, CRP family of transcriptional regulators.
  
     0.706
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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