Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
sce4330Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase. (299 aa)    
Predicted Functional Partners:
sce5953
Probable anion transporter ATPase; Function unclear.
  
     0.715
galE4
GalE4 protein; High confidence in function and specificity.
 
    0.705
sce4259
Hypothetical protein.
 
    0.628
cdsA
Phosphatidate cytidylyltransferase; Family membership.
    
 0.548
sce0230
WD-repeat protein.
  
     0.499
sce8975
Hypothetical protein.
 
     0.464
sce4329
Hypothetical protein.
       0.458
sce4331
Protein kinase; Family membership.
  
    0.429
sce4561
Unknown protein.
  
     0.428
sce8687
Hypothetical protein; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
   0.427
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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