STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glkGlk protein; High confidence in function and specificity; Belongs to the bacterial glucokinase family. (347 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; High confidence in function and specificity; Belongs to the GPI family.
    
 0.935
zwf1
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.934
zwf2
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.934
algC
AlgC protein; High confidence in function and specificity.
     
 0.927
ppgK
Polyphosphate-glucose phosphotransferase; High confidence in function and specificity.
    
 0.922
pgm3
Pgm3 protein; High confidence in function and specificity.
    
 0.921
hxk
Hxk protein; High confidence in function and specificity.
     
 0.918
kdgA1
KdgA1 protein; High confidence in function and specificity.
  
 
 0.916
galM2
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
    
 0.911
galM1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
    
 0.911
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.