Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce4363Hypothetical protein predicted by Glimmer/Critica. (762 aa)    
Predicted Functional Partners:
sce8547
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
   
 0.677
sce3979
Unnamed protein product; Family membership.
 
     0.645
sce2540
Peptidase_S9 domain-containing protein; Unnamed protein product; Family membership.
  
     0.635
sce5088
Peptidyl-dipeptidase Dcp; Family membership.
 
     0.632
sce8590
Prolyl oligopeptidase; Family membership.
  
   
 0.599
sce0762
Prolyl endopeptidase; Family membership.
  
   
 0.536
sce4362
Hypothetical protein predicted by Glimmer/Critica.
       0.535
sce2713
Hypothetical protein.
 
     0.522
sce6497
Hypothetical protein.
  
     0.516
sce8289
Putative secreted protein.
  
    0.472
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.