Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce4418Bmp family protein. (372 aa)    
Predicted Functional Partners:
sce4415
Similar to sugar ABC transporter, ATP-binding protein; Specificity unclear.
 
 
 0.980
sce3552
Putative simple sugar transport system permease protein; Family membership; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.970
sce4413
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.970
sce4412
Putative simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.966
sce3553
Putative simple sugar transport system permease protein; Family membership; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.965
sce3554
Putative sugar ABC transporter ATP-binding protein; High confidence in function and specificity.
 
 
 0.964
sce7756
Uncharacterized ABC-type transport system,permease component; Family membership; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.963
sce7757
Similar to ABC transporter (permease proteins); Family membership; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.962
sce7755
Sugar ABC transporter, ATP-binding protein; Family membership.
 
 
 0.956
sce3555
Bmp family protein.
  
  
 
0.928
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.