Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sce4428N-formylglutamate amidohydrolase. (290 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; High confidence in function and specificity; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
  
  
 0.792
sce4429
Hypothetical protein predicted by Glimmer/Critica.
       0.741
mgpS
ATP-dependent helicase; High confidence in function and specificity.
  
     0.714
sdeB
Putative chlorohydrolase.
 
 
 0.648
sce6019
Amidohydrolase family protein; Family membership.
  
  
 0.590
sce6459
Putative amidohydrolase; Family membership.
  
  
 0.590
sce7399
Putative metallo-dependent hydrolase; Family membership.
  
  
 0.590
sce5515
Hypothetical protein.
  
     0.585
xerD
Site-specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.562
sce5518
Putative membrane protein.
  
     0.537
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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