rpoD protein (Sorangium cellulosum So ce56) - STRING interaction network

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rpoD

RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (639 aa)

Predicted Functional Partners:

rpoB

0.968

rpoA

0.968

rpoZ

0.953

rpoC

0.951

dnaG

0.925

nusA

0.911

sce0032

0.825

sce8187

0.825

gst2

0.818

gst10

0.818

Your Current Organism:

Sorangium cellulosum So ce56

NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dnaG	nusA	sce4446	sce5800	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	N utilization substance protein A; Participates in both transcription termination and antitermination.	0.707
dnaG	rpoA	sce4446	sce7936	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.522
dnaG	rpoB	sce4446	sce0410	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.484
dnaG	rpoD	sce4446	sce4447	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.925
gst10	gst2	sce4749	sce0602	Glutathione S-transferase, putative; High confidence in function and specificity; Belongs to the GST superfamily.	Gst2 protein; Glutathione S-transferase.	0.718
gst10	rpoA	sce4749	sce7936	Glutathione S-transferase, putative; High confidence in function and specificity; Belongs to the GST superfamily.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.808
gst10	rpoB	sce4749	sce0410	Glutathione S-transferase, putative; High confidence in function and specificity; Belongs to the GST superfamily.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.803
gst10	rpoC	sce4749	sce0411	Glutathione S-transferase, putative; High confidence in function and specificity; Belongs to the GST superfamily.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.806
gst10	rpoD	sce4749	sce4447	Glutathione S-transferase, putative; High confidence in function and specificity; Belongs to the GST superfamily.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.818
gst10	rpoZ	sce4749	sce7258	Glutathione S-transferase, putative; High confidence in function and specificity; Belongs to the GST superfamily.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.829
gst2	gst10	sce0602	sce4749	Gst2 protein; Glutathione S-transferase.	Glutathione S-transferase, putative; High confidence in function and specificity; Belongs to the GST superfamily.	0.718
gst2	rpoA	sce0602	sce7936	Gst2 protein; Glutathione S-transferase.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.808
gst2	rpoB	sce0602	sce0410	Gst2 protein; Glutathione S-transferase.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.803
gst2	rpoC	sce0602	sce0411	Gst2 protein; Glutathione S-transferase.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.806
gst2	rpoD	sce0602	sce4447	Gst2 protein; Glutathione S-transferase.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.818
gst2	rpoZ	sce0602	sce7258	Gst2 protein; Glutathione S-transferase.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.849
nusA	dnaG	sce5800	sce4446	N utilization substance protein A; Participates in both transcription termination and antitermination.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.707
nusA	rpoA	sce5800	sce7936	N utilization substance protein A; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994
nusA	rpoB	sce5800	sce0410	N utilization substance protein A; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.991
nusA	rpoC	sce5800	sce0411	N utilization substance protein A; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.981

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