STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4522Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems. (278 aa)    
Predicted Functional Partners:
sce4523
Cytochrome-c oxidase; Family membership.
 
 0.980
sce4524
Cytochrome-c oxidase; Family membership; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.955
sce4525
Putative Cytochrome-c oxidase; Family membership.
 
  
 0.955
sce4520
Hypothetical protein.
 
   0.950
sce4519
Hypothetical protein; Cytochrome c mono- and diheme variants.
 
   
 0.945
sce7592
Putative Cytochrome-c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.928
sce4516
Putative oxidoreductase, iron-sulfur binding; Family membership.
 
   
 0.875
sce4518
Hypothetical protein; Nitric oxide reductase large subunit.
 
   
 0.870
sce4517
Hypothetical protein.
 
     0.840
sce4515
Hypothetical protein predicted by Glimmer/Critica.
 
   
 0.833
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.