STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfoGlucose--fructose oxidoreductase precursor; High confidence in function and specificity. (346 aa)    
Predicted Functional Partners:
sce2382
Putative secreted protein.
  
  
 0.806
gnl2
Gnl2 protein; High confidence in function and specificity.
 
 
 0.634
lysS
Lysine--tRNA ligase; Family membership; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.618
sce0871
Hypothetical protein.
  
  
 0.604
sce1297
Hypothetical protein predicted by Glimmer/Critica.
  
  
 0.604
galK
Galactokinase; High confidence in function and specificity; Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.579
mnaA
UDP-N-acetylglucosamine 2-epimerase; High confidence in function and specificity; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.564
galE5
GalE5 protein; High confidence in function and specificity.
  
  
 0.546
galE6
Probable UDP-glucose 4-epimerase; Family membership.
  
  
 0.546
yfbE
Putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.535
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.