Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce4693Hypothetical protein. (128 aa)    
Predicted Functional Partners:
sce1384
Putative secreted protein.
  
     0.533
sce4691
Hypothetical protein.
       0.528
sce4692
Hypothetical protein.
       0.528
sce0367
Probable surface antigen.
   
    0.523
sce8836
Two-component system sensor histidine kinase; Family membership.
  
     0.467
argF1
ArgF1 protein; High confidence in function and specificity; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
     0.466
sce0091
Hypothetical protein predicted by Glimmer/Critica.
  
     0.440
sce4712
Transcriptional regulator, TetR family; Family membership.
  
     0.438
argB1
ArgB1 protein; High confidence in function and specificity.
  
     0.433
sce3335
Hypothetical protein.
  
     0.424
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.