Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
entBPutative isochorismatase; Specificity unclear. (245 aa)    
Predicted Functional Partners:
sce2665
Isochorismatase; Family membership.
  
     0.752
sce2210
Putative pyrazinamidase/nicotinamidase.
  
     0.711
mxcD
MxcD protein; High confidence in function and specificity.
     
 0.558
dhbC
DhbC protein; High confidence in function and specificity.
     
 0.558
nnrE
ADP-dependent (S)-NAD(P)H-hydrate dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to all [...]
   
    0.541
sce4766
LysR-family transcriptional regulator; Family membership; Belongs to the LysR transcriptional regulatory family.
       0.538
mxcC
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; High confidence in function and specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.510
sce3379
Putative Isochorismatase hydrolase; Family membership.
  
   
0.416
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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