STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4774Peptidase M10A; Family membership. (349 aa)    
Predicted Functional Partners:
sce4773
Hypothetical protein.
       0.773
sce4775
Hypothetical protein.
       0.741
surE2
5'-nucleotidase, cytosolic II; High confidence in function and specificity.
  
     0.633
sce0153
Putative secreted protein.
  
     0.602
sce8646
Hypothetical protein predicted by Glimmer/Critica.
  
     0.602
sce3608
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase; High confidence in function and specificity.
  
     0.583
sce7416
Hypothetical protein; FOG: WD40 repeat.
  
     0.552
sce3914
Hypothetical protein.
  
     0.541
sce5957
DNA helicase; Unnamed protein product; Hypothetical protein.
 
     0.532
sce8277
Probable Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
     0.526
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.