STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4779Hypothetical protein; Hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives. (252 aa)    
Predicted Functional Partners:
sce1561
Hypothetical protein; FOG: TPR repeat SEL1 subfamily.
  
     0.774
sce8879
Putative glutathione S-transferase; Family membership.
  
     0.494
sce2670
Hypothetical protein predicted by Glimmer/Critica.
  
    0.459
hcaT
Permease of the major facilitator superfamily,probable 3-phenylpropionate transporter.
  
     0.443
sce6861
Hypothetical protein similar to eukaryotic regulators / effectors.
  
    0.437
hisS
Histidine--tRNA ligase; High confidence in function and specificity.
    
  0.412
sce1542
Putative protease inhibitor; Family membership.
  
    0.403
sce5687
Putative AAA family ATPase; Family membership.
 
 
 0.400
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.