STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpgPutative sugar-phosphate nucleotide transferase; High confidence in function and specificity. (236 aa)    
Predicted Functional Partners:
sce3746
Sugar kinase; Family membership.
  
 0.898
galE5
GalE5 protein; High confidence in function and specificity.
 
  
 0.887
sce1842
Oxidoreductase; Family membership.
  
 
 0.844
sce6794
Nucleotidyltransferase; Family membership.
  
  
 0.818
sce4870
NDP-sugar oxidoreductase; Specificity unclear.
 
 
 0.717
sce1037
NDP-sugar oxidoreductase; Specificity unclear.
 
 
 0.641
galE6
Probable UDP-glucose 4-epimerase; Family membership.
 
  
 0.607
sce3055
Hypothetical protein with NDP-sugar oxidoreductase domain; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.579
sce7377
NDP-sugar oxidoreductase; Specificity unclear.
 
 
 0.544
yfbE
Putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.543
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.